Assignment: GS540 HW3
Name: Alex Eng
Email: engal@uw.edu
Language: C++
Running Time: 0.25 sec

Segment Histogram:
Normal Segments=20
Elevated CN Segments=19

Elevated CN Segment List:
5 5040 122.295
16362 18689 120.926
23543 28665 58.6993
32547 41224 187.732
44697 62962 333.894
66515 76797 612.321
87713 95382 432.805
98600 132883 1414.58
143569 146231 150.875
152582 154097 51.008
163025 168920 956.334
174429 183806 72.2612
191096 200526 383.478
204275 206444 54.1736
208800 229409 309.095
237427 238424 37.2861
240198 258156 397.234
264071 290437 420.081
293802 296117 58.5769

Annotations:

Start: 5
End: 5040
Something interesting (e.g. "Overlaps with exon3 of the protein coding gene cMyc")

Start: 16362
End: 18689
Something interesting (e.g. "Overlaps with exon4 of the protein coding gene cMyc")

Start: 23543
End: 28665
Something interesting (e.g. "Overlaps with exon5 of the protein coding gene cMyc")

Read Start Histogram for Non-Elevated CN Segments:
0=163440
1=4758
2=680
>=3=150

Read Start Histogram for Elevated CN Segments:
0=170124
1=15223
2=3944
>=3=1681

Program:

YOUR CODE HERE