Assignment: GS540 HW4
Name: Serena Liu
Email: selenay@uw.edu
Language: Java
Runtime: 1 min

Score: 82.0

Edge weights:
--A = -12
--C = -12
--D = -12
--E = -12
--F = -12
.
.
.
list all edge weights in alphabetical order 
(only first/last 5 shown here)
.
.
.
YYS = 3
YYT = 3
YYV = 5
YYW = 11
YYY = 21

Edge counts:
--A = 8832
--C = 17664
--D = 52992
--E = 70656
--F = 44160
.
.
.
list all the edge counts in alphabetical order
(only first/last 5 shown here)
.
.
.
YYS = 48
YYT = 24
YYV = 72
YYW = 24
YYY = 60

Local alignment:
KKK
DLK
YWY
G--
LFL
KVN
REH
IPI
QRQ
KPN
SNS
AVV
FFF
MVE
GSG
SGE
LVI
KKS
KDE
HSP
AVQ
LAI
NQL
STN
LVL
LVK
TDY
DYE
LLL
RLN
RQK
MYY
VTI
--R
--K
NPD
VVI
DED
SSS
-G-
VLV
IMI
VLL
FFF


Program 1:

Include your graph generating program here.


Program 2:

Include your local alignment program here (possibly identical to hw2).