Assignment: GS540 HW7
Name: Serena Liu
Email: selenay@uw.edu
Language: Java
Time: 5 mins

Fasta:
>gi|206900094|ref|NC_011297.1| Dictyoglomus thermophilum H-6-12, complete genome

Iterations for Convergence:
7

Log Likelihood:
-1507.345

Initial State Probabilities:
1=9.000e-1
2=1.000e-1

Transition Probabilities:
1,1=9.990e-1
1,2=1.000e-3
2,1=2.100e-1
2,2=7.900e-1

Emission Probabilities:
1,A=2.500e-1
1,C=2.500e-1
1,G=2.500e-1
1,T=2.500e-1
2,A=3.000e-1
2,C=2.500e-1
2,G=2.500e-1
2,T=2.000e-1


Program:

INCLUDE YOUR CODE HERE