Assignment: GS 540 HW3
Name: Serena Liu
Email: selenay@uw.edu
Language: Java
Runtime: 1 sec

Segment Histogram:
Non-Elevated CN Segments=8
Elevated CN Segments=7

Elevated CN Segment List:
48164 48273 66.76
67646 68115 97.51
105528 106003 63.04
106904 107345 41.67
122792 123034 66.56
164376 164665 62.09
165086 166103 225.95

Annotations:

Start: 48164
End: 48273
Description: Something interesting (e.g. "Overlaps with exon3 of the protein coding gene cMyc")

Start: 67646
End: 68115
Description: Something interesting (e.g. "Overlaps with exon4 of the protein coding gene cMyc")

Start: 105528
End: 106003
Description: Something interesting (e.g. "Overlaps with exon5 of the protein coding gene cMyc")

Read Start Histogram for Non-Elevated CN Segments:
0=331908
1=19439
2=4272
>=3=1332

Read Start Histogram for Elevated CN Segments:
0=1656
1=542
2=352
>=3=499

Program:

YOUR CODE HERE